STRINGSTRING
XCC0048 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0048" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0048Uncharacterized protein (218 aa)    
Predicted Functional Partners:
CAP49380.1
Unknown (158 aa)
          0.996
XCC3086
annotation not available (168 aa)
 
          0.903
XCC0386
annotation not available (111 aa)
   
          0.575
XCC1065
annotation not available (87 aa)
   
          0.569
XCC0572
annotation not available (384 aa)
   
          0.534
folE
GTP cyclohydrolase 1; Unnamed protein product (209 aa)
     
      0.504
XCC1402
annotation not available (138 aa)
   
          0.476
mcrB
annotation not available (126 aa)
   
          0.454
XCC1063
annotation not available (176 aa)
   
          0.449
XCC0047
annotation not available (283 aa)
              0.442
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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