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XCC0050 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0050" - Outer membrane receptor proteins, mostly Fe transport in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0050Outer membrane receptor proteins, mostly Fe transport (897 aa)    
Predicted Functional Partners:
XCC0049
Uncharacterized protein conserved in bacteria (262 aa)
 
          0.933
avrBs2
Avirulence protein; Glycerophosphoryl diester phosphodiesterase,probable (718 aa)
 
          0.808
XCC2382
annotation not available (235 aa)
   
          0.751
XCC2078
annotation not available (597 aa)
 
 
  0.731
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
   
          0.675
XCC4237
Oar protein; Outer membrane receptor for ferrienterochelin and colicins (1006 aa)
   
   
  0.665
hrpB1
annotation not available (151 aa)
   
          0.658
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (365 aa)
           
  0.640
mxaF2
Glucose dehydrogenase (575 aa)
   
        0.630
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
   
          0.623
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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