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STRINGSTRING
avrBs2 protein (Xanthomonas campestris campestris) - STRING interaction network
"avrBs2" - Avirulence protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
avrBs2Avirulence protein; Glycerophosphoryl diester phosphodiesterase,probable (718 aa)    
Predicted Functional Partners:
XCC0050
Outer membrane receptor proteins, mostly Fe transport (897 aa)
 
          0.808
XCC0049
Uncharacterized protein conserved in bacteria (262 aa)
 
          0.804
XCC2403
annotation not available (98 aa)
   
 
      0.796
gumG
GumG protein; Fucose 4-O-acetylase and related acetyltransferases (356 aa)
   
     
  0.790
hrpB1
annotation not available (151 aa)
   
     
  0.788
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
   
     
  0.780
hrpB5
HrpB5 protein; Flagellar biosynthesis/type III secretory pathway protein (233 aa)
   
     
  0.779
hrpD5
annotation not available (315 aa)
   
     
  0.773
hpaP
annotation not available (203 aa)
   
     
  0.770
XCC3797
annotation not available (144 aa)
   
          0.762
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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