STRINGSTRING
XCC0053 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0053" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0053Uncharacterized protein; Predicted exonuclease (496 aa)    
Predicted Functional Partners:
XCC0054
ATP-dependent RNA helicase; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster (839 aa)
 
          0.972
XCC4130
annotation not available (324 aa)
   
          0.529
XCC1424
annotation not available (142 aa)
   
          0.481
XCC3031
annotation not available (256 aa)
   
          0.442
XCC3383
annotation not available (114 aa)
   
          0.440
XCC0201
annotation not available (140 aa)
   
          0.440
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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