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XCC0054 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0054" - ATP-dependent RNA helicase in Xanthomonas campestris campestris
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
XCC0054ATP-dependent RNA helicase; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster (839 aa)    
Predicted Functional Partners:
XCC0053
Uncharacterized protein; Predicted exonuclease (496 aa)
 
          0.972
recQ
Superfamily II DNA helicase (600 aa)
   
 
0.792
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (831 aa)
   
 
  0.736
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (927 aa)
     
 
  0.677
XCC0524
Helicase; Superfamily II DNA/RNA helicases, SNF2 family (967 aa)
 
 
  0.669
CAP51772.1
Topoisomerase IA (670 aa)
   
 
  0.624
CAP51793.1
Superfamily II DNA/RNA helicases, SNF2 family (759 aa)
   
 
  0.602
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (226 aa)
     
 
  0.593
dnaN
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (366 aa)
     
 
  0.574
XCC1100
Unnamed protein product (471 aa)
   
 
  0.568
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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