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STRINGSTRING
XCC0128 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0128" - Transposase and inactivated derivatives in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0128Transposase and inactivated derivatives (404 aa)    
Predicted Functional Partners:
XCC0127
Transposase and inactivated derivatives IS5 family (326 aa)
           
  0.708
CAP49400.1
annotation not available (57 aa)
              0.638
CAP49401.1
annotation not available (125 aa)
            0.637
aspG
Asparaginase (354 aa)
           
  0.583
chiA
Uncharacterized protein; Predicted glycosyl hydrolase (353 aa)
           
  0.578
nahA
N-acetyl-beta-hexosaminidase (827 aa)
           
  0.578
bmnA
Beta-mannosidase; Beta-galactosidase/beta-glucuronidase (893 aa)
           
  0.489
bga2
Beta-galactosidase (680 aa)
           
  0.489
XCC3092
Plasmid stabilization system protein (100 aa)
   
          0.447
CAP51421.1
Transposase and inactivated derivatives (68 aa)
   
          0.441
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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