STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0073Predicted signal transduction protein COG: Predicted signal transduction protein (375 aa)    
Predicted Functional Partners:
XCC0572
annotation not available
  
     0.695
XCC1430
annotation not available
  
     0.648
XCC3161
Outer membrane receptor proteins mostly Fe transport
  
     0.634
CAP52000.1
Phage-related minor tail protein
  
     0.604
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants
  
     0.599
CAP52472.1
Type V secretory pathway, adhesin AidA
  
     0.582
XCC0439
annotation not available
  
     0.581
XCC0114
Transcriptional regulator; FOG: WD40 repeat
  
     0.572
torS
Two-component system sensor protein; Signal transduction histidine kinase
 
 
 
 0.572
xcsL
Type II secretory pathway component PulL
  
     0.564
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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