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atsE protein (Xanthomonas campestris campestris) - STRING interaction network
"atsE" - AtsE in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsEAtsE; Protein required for attachment to host cells (132 aa)    
Predicted Functional Partners:
XCC0082
Thioredoxin; Thiol-disulfide isomerase and thioredoxins (110 aa)
              0.818
aes
Esterase/lipase (380 aa)
              0.600
XCC3590
annotation not available (818 aa)
   
          0.443
XCC3589
annotation not available (725 aa)
   
          0.438
XCC3687
Regulatory protein; FOG- CheY-like receiver (127 aa)
   
          0.429
XCC3366
Uncharacterized protein; Methyltransferase (223 aa)
   
          0.427
XCC0274
annotation not available (143 aa)
   
          0.408
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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