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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0090Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) (298 aa)    
Predicted Functional Partners:
XCC0091
Methanol dehydrogenase regulator; MoxR-like ATPases
   
 0.967
XCC0089
annotation not available
 
     0.915
XCC0088
annotation not available
 
     0.912
XCC0092
annotation not available
 
     0.907
XCC0093
TldD protein; Predicted Zn-dependent proteases and their inactivated homologs
 
     0.881
XCC0094
TldD protein; Predicted Zn-dependent proteases and their inactivated homologs
 
     0.865
XCC0087
annotation not available
 
     0.847
XCC0095
TldD protein; Predicted Zn-dependent proteases and their inactivated homologs
 
     0.701
XCC3227
Methanol dehydrogenase regulatory protein; MoxR-like ATPases
 
   
 0.608
XCC1008
Methanol dehydrogenase regulator; MoxR-like ATPases
   
 0.531
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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