close STRING Data Update
The upcoming version of STRING is available for preview: it includes new data, new enrichment categories (e.g. diseases and tissues) and covers 14000 fully sequenced genomes.
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0114Transcriptional regulator; FOG: WD40 repeat (1172 aa)    
Predicted Functional Partners:
XCC0113
annotation not available
       0.898
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants
  
   
 0.768
XCC0541
annotation not available
  
     0.760
XCC1185
annotation not available
   
 
 0.759
XCC1430
annotation not available
 
     0.751
XCC0372
Hydrolase; Lysophospholipase
 
 
   0.743
XCC2116
annotation not available
  
 
 0.727
CAP52000.1
Phage-related minor tail protein
  
  
 0.725
CAP52472.1
Type V secretory pathway, adhesin AidA
  
  
 0.713
XCC3161
Outer membrane receptor proteins mostly Fe transport
  
   
 0.709
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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