STRINGSTRING
XCC0120 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0120" - Outer membrane receptor proteins, mostly Fe transport in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0120Outer membrane receptor proteins, mostly Fe transport (1066 aa)    
Predicted Functional Partners:
pel4
Pectate lyase E; Degradation of external pectate (251 aa)
 
     
  0.950
CAP49462.1
Unknown (90 aa)
 
          0.939
tonB
Periplasmic protein TonB, links inner and outer membranes (224 aa)
   
 
  0.883
XCC2927
Periplasmic protein TonB links inner and outer membranes (291 aa)
   
 
  0.883
pme1
Pectinesterase; Pectin methylesterase (325 aa)
 
     
  0.856
tonB1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) (223 aa)
   
 
  0.813
XCC0123
Uncharacterized protein (1283 aa)
 
          0.761
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (354 aa)
           
  0.741
exbB2
annotation not available (222 aa)
   
 
  0.681
exbB1
Biopolymer transport protein ExbB; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity) (253 aa)
   
 
  0.681
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]