STRINGSTRING
CAP49462.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP49462.1" - Unknown in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP49462.1Unknown (90 aa)    
Predicted Functional Partners:
pel4
Pectate lyase E; Degradation of external pectate (251 aa)
     
  0.995
XCC0120
Outer membrane receptor proteins, mostly Fe transport (1066 aa)
 
          0.939
pme1
Pectinesterase; Pectin methylesterase (325 aa)
 
          0.935
XCC0142
Uncharacterized protein; Lysophospholipase L1 and related esterases (304 aa)
 
     
  0.759
XCC1115
annotation not available (643 aa)
   
          0.722
hrpW
annotation not available (329 aa)
   
     
  0.685
xcc-b100_1236
Acetyltransferases, including N-acetylases of ribosomal proteins (635 aa)
   
          0.649
XCC3409
Nisin-resistance protein; Periplasmic protease (456 aa)
   
          0.648
XCC1196
Uncharacterized protein conserved in bacteria (279 aa)
   
          0.646
XCC3374
annotation not available (139 aa)
   
          0.637
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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