STRINGSTRING
xylB3 protein (Xanthomonas campestris campestris) - STRING interaction network
"xylB3" - Xylosidase/arabinosidase in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
xylB3Xylosidase/arabinosidase; Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (526 aa)    
Predicted Functional Partners:
XCC0142
Uncharacterized protein; Lysophospholipase L1 and related esterases (304 aa)
 
        0.814
XCC0154
Rhamnogalacturonan acetylesterase; Lysophospholipase L1 and related esterases (381 aa)
 
   
  0.753
mhpD
2-keto-4-pentenoate hydratase (308 aa)
 
          0.696
aguA
Xylan alpha-1,2-glucuronidase; Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family (732 aa)
 
     
  0.683
abfA
Alpha-L-arabinosidase; Alpha-L-arabinofuranosidase (526 aa)
 
   
  0.646
aglA2
Alpha-xylosidase; Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family (967 aa)
 
     
  0.627
chlE
Carboxylic ester hydrolase; Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family (540 aa)
 
   
  0.627
dctM
TRAP-type C4-dicarboxylate transport system large permease component (427 aa)
              0.612
dctQ
TRAP-type C4-dicarboxylate transport system small permease component (173 aa)
              0.612
dctP
TRAP-type C4-dicarboxylate transport system,periplasmic component (332 aa)
              0.604
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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