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STRINGSTRING
XCC0163 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0163" - Ca2+-binding protein (EF-Hand superfamily) in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0163Ca2+-binding protein (EF-Hand superfamily) (117 aa)    
Predicted Functional Partners:
XCC0162
Fatty-acid desaturase (409 aa)
   
   
  0.807
XCC1424
annotation not available (142 aa)
   
          0.766
XCC3383
annotation not available (114 aa)
   
          0.761
XCC3484
annotation not available (239 aa)
   
          0.758
XCC2843
Uncharacterized protein (83 aa)
   
          0.744
CAP52117.1
annotation not available (36 aa)
   
          0.720
CAP52116.1
annotation not available (36 aa)
   
          0.720
CAP52115.1
annotation not available (36 aa)
   
          0.720
CAP52114.1
annotation not available (36 aa)
   
          0.720
CAP52113.1
annotation not available (36 aa)
   
          0.720
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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