STRINGSTRING
yehZ protein (Xanthomonas campestris campestris) - STRING interaction network
"yehZ" - ABC transporter amino acid permease in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehZABC transporter amino acid permease; Glycine betaine/choline-binding ABC transporter components (490 aa)    
Predicted Functional Partners:
yehX
ABC transporter ATP-binding protein; ABC-type sugar transport systems, ATPase components (245 aa)
  0.999
XCC0597
Cystathionine beta-synthase; Cysteine synthase (456 aa)
   
   
  0.722
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (485 aa)
   
   
  0.684
kdsD
Arabinose 5-phosphate isomerase; Predicted sugar phosphate isomerase involved in capsule formation (333 aa)
   
   
  0.680
XCC0088
annotation not available (754 aa)
         
  0.651
XCC0163
Ca2+-binding protein (EF-Hand superfamily) (117 aa)
              0.651
XCC0162
Fatty-acid desaturase (409 aa)
              0.580
XCC0167
Uncharacterized protein (429 aa)
 
        0.560
XCC0168
Uncharacterized protein (328 aa)
 
          0.550
betT
Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family (659 aa)
         
  0.538
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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