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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0175Uncharacterized protein; Phosphohistidine phosphatase SixA (158 aa)    
Predicted Functional Partners:
XCC0176
Uncharacterized protein; Belongs to the UPF0312 family
       0.898
cls2
Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate
       0.898
XCC0174
Partition protein; ATPases involved in chromosome partitioning
       0.872
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
   
  
 0.604
XCC2360
Signal transduction histidine kinase
     
 0.578
XCC0178
Uncharacterized protein possibly involved in aromatic compounds catabolism
       0.500
plsC1
Acetyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase
       0.459
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2
  
    0.440
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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