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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0176Uncharacterized protein; Belongs to the UPF0312 family (190 aa)    
Predicted Functional Partners:
XCC0175
Uncharacterized protein; Phosphohistidine phosphatase SixA
       0.898
cls2
Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate
       0.898
XCC0174
Partition protein; ATPases involved in chromosome partitioning
       0.872
XCC2849
Uncharacterized protein; Belongs to the UPF0312 family
  
     0.641
XCC0181
Uncharacterized protein; FOG: TPR repeat
 
     0.626
XCC2851
Uncharacterized protein; Belongs to the UPF0312 family
  
     0.615
XCC3606
Uncharacterized protein; Belongs to the UPF0312 family
  
     0.581
XCC0178
Uncharacterized protein possibly involved in aromatic compounds catabolism
       0.500
plsC1
Acetyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase
       0.460
XCC2866
annotation not available
  
     0.458
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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