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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0178Uncharacterized protein possibly involved in aromatic compounds catabolism (144 aa)    
Predicted Functional Partners:
plsC1
Acetyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase
       0.859
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
     
 0.708
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
      
 0.702
XCC0180
Uncharacterized protein; Predicted hydrolase of the alpha/beta-hydrolase fold
       0.694
xpsF
Type II secretion system protein F; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
      
 0.590
pilU
Twitching motility protein; Tfp pilus assembly protein ATPase PilU
      
 0.585
flgF
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family
      
 0.585
groES
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
      
 0.580
XCC0181
Uncharacterized protein; FOG: TPR repeat
   
   0.564
cls2
Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate
       0.501
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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