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STRINGSTRING
amtB protein (Xanthomonas campestris campestris) - STRING interaction network
"amtB" - Ammonium transporter in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtBAmmonium transporter; Ammonia permease (491 aa)    
Predicted Functional Partners:
glnB1
Nitrogen regulatory protein PII; Belongs to the P(II) protein family (114 aa)
 
  0.998
glnB2
Nitrogen regulatory protein PII; Belongs to the P(II) protein family (112 aa)
 
  0.997
cysNC
Multifunctional fusion protein; Catalyzes the synthesis of activated sulfate; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily (658 aa)
     
   
  0.880
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
 
   
  0.862
ntrB
Two-component system sensor protein; Signal transduction histidine kinase nitrogen specific (349 aa)
 
 
  0.799
glnA1
Glutamine synthetase (469 aa)
   
   
  0.774
trn2
Tropinone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (258 aa)
           
  0.704
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (927 aa)
         
  0.659
XCC3087
Polyphenol oxidase; Belongs to the multicopper oxidase YfiH/RL5 family (266 aa)
            0.655
XCC4076
Two-component system sensor protein; Na+/proline symporter (1147 aa)
   
 
  0.614
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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