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hemY protein (Xanthomonas campestris campestris) - STRING interaction network
"hemY" - Porphyrin biosynthesis protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemYPorphyrin biosynthesis protein; Uncharacterized enzyme of heme biosynthesis (421 aa)    
Predicted Functional Partners:
XCC0197
Uncharacterized enzyme of heme biosynthesis (325 aa)
 
 
  0.978
hemD
Uroporphyrinogen-III synthase (266 aa)
 
   
  0.933
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps; Belongs to the HMBS family (304 aa)
   
   
  0.768
hemL
Glutamate-1-semialdehyde aminotransferase (429 aa)
     
   
  0.761
XCC0711
Unnamed protein product (576 aa)
   
        0.755
tolA
annotation not available (345 aa)
   
        0.735
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
        0.710
XCC1144
annotation not available (168 aa)
   
          0.698
XCC0986
annotation not available (218 aa)
   
        0.685
cheB1
Protein-glutamate methylesterase; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain (393 aa)
   
          0.684
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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