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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0197Uncharacterized enzyme of heme biosynthesis (325 aa)    
Predicted Functional Partners:
hemD
Uroporphyrinogen-III synthase
 
 
 0.981
hemY
Porphyrin biosynthesis protein; Uncharacterized enzyme of heme biosynthesis
 
 
 0.978
XCC2003
Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)
   
 
 0.912
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
  
 
 0.907
cysG
Siroheme synthase; Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family
   
 
 0.902
XCC2010
Uroporphyrin-III C-methyltransferase; Uroporphyrinogen-III methylase
   
 
 0.805
XCC2390
annotation not available
  
     0.757
XCC3848
annotation not available
  
     0.751
XCC1572
annotation not available
  
     0.747
XCC0193
annotation not available
  
     0.738
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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