STRINGSTRING
lgtB protein (Xanthomonas campestris campestris) - STRING interaction network
"lgtB" - Glycosyltransferase involved in LPS biosynthesis in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgtBGlycosyltransferase involved in LPS biosynthesis (269 aa)    
Predicted Functional Partners:
XCC0155
annotation not available (285 aa)
   
          0.688
XCC4126
annotation not available (190 aa)
   
          0.676
galE
UDP-glucose 4-epimerase (410 aa)
         
  0.656
XCC2271
annotation not available (281 aa)
   
          0.636
XCC0049
Uncharacterized protein conserved in bacteria (262 aa)
   
          0.607
XCC1829
annotation not available (133 aa)
   
          0.576
XCC0084
annotation not available (152 aa)
   
          0.560
XCC3376
annotation not available (123 aa)
   
          0.547
XCC0201
annotation not available (140 aa)
 
          0.544
XCC0200
annotation not available (156 aa)
              0.544
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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