STRINGSTRING
CAP49565.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP49565.1" - Uncharacterized conserved protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP49565.1Uncharacterized conserved protein (372 aa)    
Predicted Functional Partners:
dhaA
Haloalkane dehalogenase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (300 aa)
              0.692
fabH1
3-oxoacyl-[acyl-carrier-protein] synthase III (338 aa)
              0.668
CAP52644.1
Virulence protein (360 aa)
 
          0.469
XCC0211
annotation not available (106 aa)
              0.446
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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