close STRING Data Update
The upcoming version of STRING is available for preview: it includes new data, new enrichment categories (e.g. diseases and tissues) and covers 14000 fully sequenced genomes.
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0226annotation not available (179 aa)    
Predicted Functional Partners:
plsC2
Acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase
       0.737
XCC2792
annotation not available
  
     0.733
XCC2621
annotation not available
  
     0.695
XCC2715
annotation not available
  
     0.687
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins
  
     0.683
XCC3794
annotation not available
  
     0.679
XCC2762
annotation not available
  
     0.665
XCC1973
annotation not available
  
     0.664
XCC1144
annotation not available
  
     0.660
XCC2649
annotation not available
  
     0.659
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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