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XCC0227 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0227" - Peptidyl-tRNA hydrolase in Xanthomonas campestris campestris
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XCC0227Peptidyl-tRNA hydrolase; Protein chain release factor B (143 aa)    
Predicted Functional Partners:
plsC2
Acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase (209 aa)
   
        0.898
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family (86 aa)
   
      0.871
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (106 aa)
     
      0.869
ansA
annotation not available (89 aa)
              0.801
rpmA
Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (86 aa)
     
      0.791
rplQ
Ribosomal protein L17 (127 aa)
     
      0.756
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
     
 
  0.744
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (216 aa)
     
 
  0.740
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (155 aa)
   
 
  0.738
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (119 aa)
   
 
  0.737
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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