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XCC0235 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0235" - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0235Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain (245 aa)    
Predicted Functional Partners:
rbcR
Transcriptional regulator (318 aa)
 
        0.801
XCC0234
Uncharacterized protein; Predicted enzyme related to lactoylglutathione lyase (124 aa)
 
          0.785
XCC0700
annotation not available (525 aa)
   
          0.594
aceB
Malate synthase (540 aa)
   
        0.516
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (332 aa)
       
 
  0.484
XCC0114
Transcriptional regulator; FOG- WD40 repeat (1172 aa)
 
     
  0.411
dnrO
Repressor; Predicted transcriptional regulator (339 aa)
   
          0.410
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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