STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0240annotation not available (886 aa)    
Predicted Functional Partners:
XCC0239
Uncharacterized protein; FOG: GGDEF domain
 
 
 0.987
XCC1185
annotation not available
  
 
 0.814
XCC2153
Two-component system sensor protein; FOG: PAS/PAC domain
  
 
 0.799
tlpC
Methyl-accepting chemotaxis protein
   
 
 0.760
XCC2426
Histidine kinase/response regulator hybrid protein; FOG: PAS/PAC domain
  
 
 0.756
XCC2360
Signal transduction histidine kinase
   
 
 0.753
XCC3348
Signal transduction histidine kinase regulating C4-dicarboxylate transport system
  
 
 0.750
pilL
Chemotaxis protein histidine kinase and related kinases
  
 
 0.750
XCC3686
Methyltransferase; Unnamed protein product
     
 0.744
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family
  
 
 0.743
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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