STRINGSTRING
XCC0242 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0242" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0242Uncharacterized protein; Nitroreductase (398 aa)    
Predicted Functional Partners:
XCC1707
Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (225 aa)
         
  0.716
pcm
Protein-L-isoaspartate carboxylmethyltransferase (218 aa)
         
  0.716
dauE
Aklaviketone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (257 aa)
   
   
  0.608
XCC0241
annotation not available (112 aa)
              0.602
thrC
Threonine synthase; Unnamed protein product (435 aa)
           
  0.584
XCC2003
Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) (332 aa)
         
  0.499
XCC0439
annotation not available (221 aa)
   
          0.462
XCC3372
Uncharacterized protein; Imidazolonepropionase and related amidohydrolases (422 aa)
   
     
  0.455
XCC2562
Uncharacterized membrane protein (homolog of Drosophila rhomboid) (487 aa)
   
          0.451
CAP49569.1
annotation not available (524 aa)
   
          0.430
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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