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mccB protein (Xanthomonas campestris campestris) - STRING interaction network
"mccB" - Acyl-CoA carboxyltransferase beta chain in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mccBAcyl-CoA carboxyltransferase beta chain; Leucine degradation (536 aa)    
Predicted Functional Partners:
ivd
Acyl-CoA dehydrogenase; Leucine degradation (387 aa)
 
  0.997
mccA
Biotin carboxylase; Leucine degradation (680 aa)
  0.992
XCC1833
Enoyl-CoA hydratase/carnithine racemase (265 aa)
 
  0.970
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase (690 aa)
   
 
  0.967
mvaB
Hydroxymethylglutaryl-CoA lyase; Isopropylmalate/homocitrate/citramalate synthases (298 aa)
 
  0.877
fadB2
3-hydroxyacyl-CoA dehydrogenase (790 aa)
   
   
  0.685
XCC0247
Transcriptional regulator (205 aa)
         
  0.602
fadE4
Acyl-CoA dehydrogenases (393 aa)
   
  0.579
fadB1
3-hydroxyacyl-CoA dehydrogenase type II; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (256 aa)
 
          0.572
mdcA
annotation not available (548 aa)
   
 
  0.570
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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