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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
XCC0248 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0248" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0248annotation not available (133 aa)    
Predicted Functional Partners:
XCC0249
annotation not available (178 aa)
 
     
  0.979
XCC2436
Uncharacterized protein (194 aa)
   
          0.745
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis (382 aa)
   
          0.729
XCC4063
annotation not available (196 aa)
   
          0.700
XCC0247
Transcriptional regulator (205 aa)
              0.655
plaS
Accessory protein; FOG- Ankyrin repeat (254 aa)
   
          0.622
XCC0684
Serine protease; Function unknown (552 aa)
   
          0.601
XCC3443
Methyltransferase; DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family (354 aa)
   
          0.590
CAP51033.1
annotation not available (136 aa)
   
          0.561
XCC3075
annotation not available (388 aa)
   
          0.561
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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