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STRINGSTRING
XCC0249 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0249" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0249annotation not available (178 aa)    
Predicted Functional Partners:
XCC0248
annotation not available (133 aa)
 
     
  0.979
XCC3075
annotation not available (388 aa)
   
          0.675
XCC0247
Transcriptional regulator (205 aa)
              0.655
XCC1496
annotation not available (177 aa)
   
          0.642
XCC2722
Outer membrane phospholipase A (398 aa)
   
          0.640
malT
ATP-dependent transcriptional regulator (921 aa)
   
          0.637
XCC3443
Methyltransferase; DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family (354 aa)
 
          0.612
XCC3444
annotation not available (381 aa)
 
          0.569
XCC2560
annotation not available (278 aa)
   
          0.562
XCC1613
Integrase; Belongs to the ’phage’ integrase family (482 aa)
   
          0.520
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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