STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0252annotation not available (103 aa)    
Predicted Functional Partners:
XCC0250
annotation not available
 
     0.976
XCC0251
annotation not available
 
     0.969
XCC0253
annotation not available
 
     0.914
XCC3596
Uncharacterized iron-regulated membrane protein
 
     0.727
XCC3598
annotation not available
  
     0.699
XCC3597
annotation not available
  
     0.563
fpvA1
Outer membrane receptor for monomeric catechols
 
     0.554
XCC0155
annotation not available
  
     0.550
fpvA2
Outer membrane receptor proteins, mostly Fe transport
 
     0.547
fhuE
Outer membrane receptor proteins, mostly Fe transport
 
     0.514
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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