STRINGSTRING
XCC0254 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0254" - Cytochrome c5 in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0254Cytochrome c5 (172 aa)    
Predicted Functional Partners:
XCC3398
Cytochrome c553 (265 aa)
 
   
  0.848
petC
Cytochrome c1 (247 aa)
   
     
  0.727
cycM
Cytochrome c553 (134 aa)
 
     
  0.596
XCC3028
Uncharacterized protein; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold (219 aa)
   
          0.589
copA
Putative multicopper oxidases (602 aa)
     
 
  0.554
XCC0255
Nuclease; Predicted extracellular nuclease (572 aa)
 
          0.544
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (419 aa)
   
     
  0.456
XCC2144
Cytochrome c553 (128 aa)
 
     
  0.452
XCC0253
annotation not available (215 aa)
              0.432
XCC2318
annotation not available (126 aa)
   
          0.430
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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