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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0256annotation not available (127 aa)    
Predicted Functional Partners:
XCC0257
Nitrile hydratase activator; Putative GTPases (G3E family)
       0.641
yegD
Heat shock protein; Molecular chaperone
  
     0.579
XCC2403
annotation not available
  
     0.556
XCC1887
Uncharacterized protein; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
  
     0.550
XCC1037
Outer membrane receptor proteins mostly Fe transport
  
     0.462
XCC1892
Outer membrane receptor proteins mostly Fe transport
  
     0.461
XCC2401
annotation not available
  
     0.427
XCC2573
Oar protein; Outer membrane receptor for ferrienterochelin and colicins
  
     0.423
XCC2385
Outer membrane receptor proteins mostly Fe transport
  
     0.419
CAP50899.1
Outer membrane receptor for ferrienterochelin and colicins
  
     0.410
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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