STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0270Putative NADP-dependent oxidoreductases (342 aa)    
Predicted Functional Partners:
XCC0269
Oxidoreductase; Aldo/keto reductases, related to diketogulonate reductase
  
   0.768
fadH
NADH:flavin oxidoreductases Old Yellow Enzyme family
  
 
 0.708
XCC0859
Tryptophan repressor binding protein; Multimeric flavodoxin WrbA; Belongs to the WrbA family
   
    0.641
wrbA
Tryptophan repressor binding protein; Multimeric flavodoxin WrbA
   
    0.641
XCC0271
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
  
    0.635
ndh
NADH dehydrogenase FAD-containing subunit
      
 0.586
gst3
Glutathione S-transferase; Belongs to the GST superfamily
 
  
 0.548
XCC3360
NonF-related protein; Putative intracellular protease/amidase
 
    0.510
nerA
NADH:flavin oxidoreductases Old Yellow Enzyme family
 
 
 0.497
nuoE
NADH:ubiquinone oxidoreductase 24 kD subunit
      
 0.489
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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