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STRINGSTRING
XCC0272 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0272" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0272Uncharacterized protein; Predicted methyltransferase (284 aa)    
Predicted Functional Partners:
XCC2867
Outer membrane receptor proteins mostly Fe transport (928 aa)
   
          0.627
CAP49628.1
annotation not available (50 aa)
              0.591
XCC0024
Uncharacterized protein; Predicted aminopeptidases (594 aa)
   
          0.583
XCC3079
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport (811 aa)
   
          0.558
rluE
Ribosomal large subunit pseudouridine synthase E; Responsible for synthesis of pseudouridine from uracil- 2457 in 23S ribosomal RNA (223 aa)
              0.558
XCC3043
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport (793 aa)
   
          0.556
XCC3921
Peptidase; Predicted aminopeptidases (602 aa)
   
          0.555
XCC1037
Outer membrane receptor proteins mostly Fe transport (738 aa)
   
          0.548
XCC3046
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport (799 aa)
   
          0.544
XCC0271
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) (322 aa)
              0.544
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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