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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC02785-hydroxyisourate hydrolase; Unnamed protein product; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily (119 aa)    
Predicted Functional Partners:
uriC
Uncharacterized protein conserved in bacteria
  
 0.999
hpyO
FAD-dependent urate hydroxylase; Catalyzes the hydroxylation of urate to 5- hydroxyisourate (HIU). Is likely to be involved in the urate degradation pathway to allantoin. Is slightly more efficient (about 2.6 times) with NADPH than NADH as the electron donor
    0.979
XCC0282
Uncharacterized protein; Predicted xylanase/chitin deacetylase
 
  
 0.976
amaB
N-carbamyl-L-amino acid amidohydrolase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
 
  
 0.968
XCC0283
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
 
  
 0.965
XCC0281
annotation not available
 
     0.921
XCC0277
Uncharacterized protein conserved in bacteria
       0.563
XCC0285
Transcriptional regulator
       0.506
XCC0297
Vanillate O-demethylase oxygenase subunit; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit
 
     0.422
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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