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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0281annotation not available (131 aa)    
Predicted Functional Partners:
amaB
N-carbamyl-L-amino acid amidohydrolase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
 
 
   0.954
XCC0283
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
 
     0.953
XCC0282
Uncharacterized protein; Predicted xylanase/chitin deacetylase
 
     0.941
hpyO
FAD-dependent urate hydroxylase; Catalyzes the hydroxylation of urate to 5- hydroxyisourate (HIU). Is likely to be involved in the urate degradation pathway to allantoin. Is slightly more efficient (about 2.6 times) with NADPH than NADH as the electron donor
 
     0.935
uriC
Uncharacterized protein conserved in bacteria
 
     0.925
XCC0278
5-hydroxyisourate hydrolase; Unnamed protein product; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
 
     0.921
gatA
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
     0.768
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate; In the C-terminal section; belongs to the HTP reductase family
     
 0.685
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family
  
  
 0.659
XCC0277
Uncharacterized protein conserved in bacteria
       0.577
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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