STRINGSTRING
XCC0283 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0283" - Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0283Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase (418 aa)    
Predicted Functional Partners:
amaB
N-carbamyl-L-amino acid amidohydrolase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases (423 aa)
 
 
    0.996
XCC0278
5-hydroxyisourate hydrolase; Unnamed protein product; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily (119 aa)
 
   
  0.965
uriC
Uncharacterized protein conserved in bacteria (163 aa)
 
          0.954
XCC0281
annotation not available (131 aa)
 
          0.953
XCC0282
Uncharacterized protein; Predicted xylanase/chitin deacetylase (296 aa)
 
          0.951
hpyO
FAD-dependent urate hydroxylase; Catalyzes the hydroxylation of urate to 5- hydroxyisourate (HIU). Is likely to be involved in the urate degradation pathway to allantoin. Is slightly more efficient (about 2.6 times) with NADPH than NADH as the electron donor (473 aa)
 
        0.946
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (694 aa)
   
      0.882
lctD
L-lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family (386 aa)
     
 
  0.877
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (417 aa)
   
 
  0.856
ltaE
Threonine aldolase (358 aa)
   
 
  0.840
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (12%) [HD]