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STRINGSTRING
XCC0285 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0285" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0285Transcriptional regulator (329 aa)    
Predicted Functional Partners:
opdE
Transcriptional regulator; Arabinose efflux permease (398 aa)
 
      0.665
amaB
N-carbamyl-L-amino acid amidohydrolase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases (423 aa)
     
      0.538
XCC0282
Uncharacterized protein; Predicted xylanase/chitin deacetylase (296 aa)
     
      0.537
XCC0283
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase (418 aa)
              0.506
XCC0281
annotation not available (131 aa)
              0.506
uriC
Uncharacterized protein conserved in bacteria (163 aa)
              0.506
hpyO
FAD-dependent urate hydroxylase; Catalyzes the hydroxylation of urate to 5- hydroxyisourate (HIU). Is likely to be involved in the urate degradation pathway to allantoin. Is slightly more efficient (about 2.6 times) with NADPH than NADH as the electron donor (473 aa)
              0.506
XCC0278
5-hydroxyisourate hydrolase; Unnamed protein product; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily (119 aa)
              0.506
XCC2677
Uncharacterized conserved protein contains double-stranded beta-helix domain (157 aa)
 
          0.485
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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