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gatA protein (Xanthomonas campestris campestris) - STRING interaction network
"gatA" - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatAAsp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases (435 aa)    
Predicted Functional Partners:
asnS
Asparagine--tRNA ligase; Aspartyl/asparaginyl-tRNA synthetases (464 aa)
   
  0.959
glnS
Glutamine--tRNA ligase; Glutamyl- and glutaminyl-tRNA synthetases (634 aa)
   
  0.956
ggt1
Gamma-glutamyltranspeptidase (526 aa)
 
          0.931
XCC0281
annotation not available (131 aa)
          0.768
aspS
Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (588 aa)
   
 
  0.655
XCC0283
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase (418 aa)
 
      0.646
iunH
Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family (387 aa)
 
          0.595
gluQ
Glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon (297 aa)
   
 
  0.578
gltX
Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily (467 aa)
   
 
  0.578
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Adenosine deaminase (522 aa)
 
          0.499
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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