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STRINGSTRING
XCC0298 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0298" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0298Transcriptional regulator (327 aa)    
Predicted Functional Partners:
XCC0297
Vanillate O-demethylase oxygenase subunit; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit (350 aa)
 
          0.874
vanB
Vanillate O-demethylase oxidoreductase; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 (319 aa)
 
          0.707
XCC0248
annotation not available (133 aa)
   
          0.461
tatD
Type V secretory pathway protein; Mg-dependent DNase (268 aa)
              0.440
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis (382 aa)
   
          0.440
XCC2673
Transcriptional regulator (306 aa)
   
          0.434
XCC2436
Uncharacterized protein (194 aa)
   
          0.422
hpyO
FAD-dependent urate hydroxylase; Catalyzes the hydroxylation of urate to 5- hydroxyisourate (HIU). Is likely to be involved in the urate degradation pathway to allantoin. Is slightly more efficient (about 2.6 times) with NADPH than NADH as the electron donor (473 aa)
 
          0.415
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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