STRINGSTRING
XCC0300 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0300" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0300annotation not available (225 aa)    
Predicted Functional Partners:
soxR
Predicted transcriptional regulators (148 aa)
           
  0.711
dauE
Aklaviketone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (257 aa)
   
      0.641
CAP52025.1
Integrase (489 aa)
   
          0.637
XCC2467
Uncharacterized protein; Glycogen debranching enzyme (773 aa)
   
      0.632
CAP52466.1
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member (530 aa)
   
          0.581
XCC2179
Two-component system sensor protein; Predicted periplasmic ligand-binding sensor domain (1117 aa)
   
          0.568
mobL1
Putative conjugal transfer protein; ATP-dependent exoDNAse (exonuclease V), alpha subunit (528 aa)
   
          0.562
XCC3077
annotation not available (290 aa)
   
          0.560
XCC1138
annotation not available (351 aa)
   
          0.527
XCC1012
Uncharacterized protein (388 aa)
   
          0.516
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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