STRINGSTRING
metR protein (Xanthomonas campestris campestris) - STRING interaction network
"metR" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metRTranscriptional regulator (301 aa)    
Predicted Functional Partners:
metE
5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase; Methionine synthase II (cobalamin-independent) (343 aa)
 
   
  0.931
metF1
510-methylenetetrahydrofolate reductase (285 aa)
   
   
  0.893
metF2
510-methylenetetrahydrofolate reductase (290 aa)
 
   
  0.831
metH2
5-methyltetrahydrofolate-homocysteine methyltransferase; Methionine synthase I cobalamin-binding domain (918 aa)
     
   
  0.783
mmuP
S-methylmethionine permease; Amino acid transporters (474 aa)
     
   
  0.777
XCC2856
Cystathionine beta-lyases/cystathionine gamma-synthases (405 aa)
     
   
  0.765
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (417 aa)
           
  0.729
XCC0317
annotation not available (339 aa)
 
          0.690
thrA
Bifunctional aspartokinase/homoserine dehydrogenase I; Aspartokinases (835 aa)
     
   
  0.677
sflA
NADH-dependent FMN reductase; Predicted flavoprotein (197 aa)
 
          0.675
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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