STRINGSTRING
XCC0320 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0320" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0320annotation not available (479 aa)    
Predicted Functional Partners:
XCC0376
annotation not available (259 aa)
   
          0.724
oprN3
Outer membrane component of multidrug efflux pump; Outer membrane protein (467 aa)
   
          0.585
XCC1479
Membrane-fusion protein (361 aa)
   
          0.504
XCC0047
annotation not available (283 aa)
   
          0.492
XCC1480
Toxin secretion ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components (563 aa)
   
        0.480
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
          0.479
XCC3444
annotation not available (381 aa)
   
          0.468
XCC3075
annotation not available (388 aa)
   
          0.447
XCC3474
Outer membrane receptor for monomeric catechols (794 aa)
   
          0.447
XCC0249
annotation not available (178 aa)
   
          0.437
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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