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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsr2Methyl-accepting chemotaxis protein (703 aa)    
Predicted Functional Partners:
cheA2
Chemotaxis protein histidine kinase and related kinases
 
 
 0.944
XCC1871
Unnamed protein product
 
 
 0.914
cheA1
Chemotaxis protein histidine kinase and related kinases
 
 
 0.911
cheA3
Chemotaxis protein histidine kinase and related kinases
 
 
 0.900
XCC2702
Unnamed protein product
 
 
 0.882
XCC2314
Unnamed protein product
 
 
 0.882
XCC1888
Unnamed protein product
 
   0.873
XCC1868
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
 
 
 0.861
pilL
Chemotaxis protein histidine kinase and related kinases
 
 
 0.850
XCC0323
annotation not available
       0.845
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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