STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0350Uncharacterized protein; HD-GYP domain (413 aa)    
Predicted Functional Partners:
XCC3523
Histidine kinase/response regulator hybrid protein; FOG: PAS/PAC domain
 
 0.737
XCC2153
Two-component system sensor protein; FOG: PAS/PAC domain
  
 
 0.720
XCC1185
annotation not available
  
 
 0.699
XCC1777
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
 
 
 0.686
XCC1294
Sensor histidine kinase; FOG: GGDEF domain
 
 0.578
guaA1
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP
      
 0.518
XCC2291
Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain
 
 
 
 0.513
pcaK
MFS transporter; Permeases of the major facilitator superfamily
       0.511
XCC2360
Signal transduction histidine kinase
 
  
 0.499
CAP50207.1
FOG: GGDEF domain
 
 0.493
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (7%) [HD]