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STRINGSTRING
XCC0351 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0351" - Transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0351Transcriptional regulators (293 aa)    
Predicted Functional Partners:
XCC0811
Transcriptional regulators (156 aa)
   
          0.762
CAP49709.1
Protein involved in meta-pathway of phenol degradation (136 aa)
 
          0.710
XCC0363
Vanillate O-demethylase oxygenase subunit; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit (358 aa)
 
          0.704
XCC0353
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (255 aa)
 
          0.584
XCC4126
annotation not available (190 aa)
   
          0.542
pobR
PobR regulator; AraC-type DNA-binding domain-containing proteins (298 aa)
   
     
  0.525
XCC0802
annotation not available (342 aa)
 
          0.522
ech4
P-hydroxycinnamoyl CoA hydratase/lyase; Enoyl-CoA hydratase/carnithine racemase (275 aa)
 
          0.508
xylC
Benzaldehyde dehydrogenase II; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family (493 aa)
 
     
  0.498
pobA
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (394 aa)
 
          0.486
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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