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gctA protein (Xanthomonas campestris campestris) - STRING interaction network
"gctA" - Acyl CoA:acetate/3-ketoacid CoA transferase,alpha subunit in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gctAAcyl CoA-acetate/3-ketoacid CoA transferase,alpha subunit (287 aa)    
Predicted Functional Partners:
gctB
Acyl CoA-acetate/3-ketoacid CoA transferase beta subunit (262 aa)
  0.999
pcaG
Protocatechuate 3,4-dioxygenase alpha chain; Protocatechuate 34-dioxygenase beta subunit (187 aa)
 
   
  0.901
gatAX
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases (542 aa)
         
    0.900
pcaF
Beta-ketoadipyl CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (402 aa)
   
   
  0.872
pcaH
Protocatechuate 34-dioxygenase beta subunit (245 aa)
 
   
  0.857
pcaC
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit (134 aa)
 
     
  0.838
pcaD
B-ketoadipate enol-lactone hydrolase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (260 aa)
 
     
  0.833
pcaB
3-carboxy-cis,cis-muconate cycloisomerase; Adenylosuccinate lyase (505 aa)
 
     
  0.829
pcaR
Transcriptional regulator; Unnamed protein product (286 aa)
 
     
  0.771
pobA
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (394 aa)
 
   
  0.745
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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