STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0372Hydrolase; Lysophospholipase (308 aa)    
Predicted Functional Partners:
XCC0114
Transcriptional regulator; FOG: WD40 repeat
 
 
   0.743
XCC2382
annotation not available
  
    0.724
XCC2602
annotation not available
  
   
 0.702
XCC0357
Uncharacterized protein conserved in bacteria
      
 0.701
XCC0572
annotation not available
  
     0.700
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase
 
   
 0.688
mobA
Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family
  
   
 0.667
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants
  
   
 0.663
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins
  
   
 0.662
XCC0541
annotation not available
  
     0.656
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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